Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn1O88704 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn1O88704 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn1O88704 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn1O88704 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.62■□□□□ 0.25
Hcn1O88704 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn1O88704 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn1O88704 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.61■□□□□ 0.25
Hcn1O88704 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.61■□□□□ 0.25
Hcn1O88704 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hcn1O88704 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.61■□□□□ 0.25
Hcn1O88704 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.61■□□□□ 0.25
Hcn1O88704 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn1O88704 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Hcn1O88704 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hcn1O88704 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hcn1O88704 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.6■□□□□ 0.25
Hcn1O88704 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.6■□□□□ 0.25
Hcn1O88704 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Hcn1O88704 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Mtag2-201ENSMUST00000058665 714 ntBASIC16.6■□□□□ 0.25
Hcn1O88704 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.6■□□□□ 0.25
Hcn1O88704 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Hcn1O88704 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Hcn1O88704 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn1O88704 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hcn1O88704 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.59■□□□□ 0.25
Hcn1O88704 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Hcn1O88704 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.59■□□□□ 0.25
Hcn1O88704 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.59■□□□□ 0.25
Hcn1O88704 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.59■□□□□ 0.25
Hcn1O88704 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.59■□□□□ 0.25
Hcn1O88704 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.59■□□□□ 0.25
Hcn1O88704 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.59■□□□□ 0.25
Hcn1O88704 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Hcn1O88704 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn1O88704 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hcn1O88704 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hcn1O88704 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hcn1O88704 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hcn1O88704 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hcn1O88704 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hcn1O88704 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hcn1O88704 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hcn1O88704 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.58■□□□□ 0.24
Hcn1O88704 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hcn1O88704 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hcn1O88704 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hcn1O88704 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hcn1O88704 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hcn1O88704 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hcn1O88704 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hcn1O88704 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hcn1O88704 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hcn1O88704 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Hcn1O88704 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hcn1O88704 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hcn1O88704 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hcn1O88704 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms