Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cldn1O88551 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.86□□□□□ -0.03
Cldn1O88551 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.86□□□□□ -0.03
Cldn1O88551 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.86□□□□□ -0.03
Cldn1O88551 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.86□□□□□ -0.03
Cldn1O88551 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldn1O88551 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldn1O88551 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldn1O88551 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.86□□□□□ -0.03
Cldn1O88551 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldn1O88551 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cldn1O88551 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldn1O88551 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cldn1O88551 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldn1O88551 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldn1O88551 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cldn1O88551 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cldn1O88551 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.85□□□□□ -0.03
Cldn1O88551 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cldn1O88551 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Gm7153-201ENSMUST00000117092 455 ntBASIC14.85□□□□□ -0.03
Cldn1O88551 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.85□□□□□ -0.03
Cldn1O88551 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cldn1O88551 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.85□□□□□ -0.03
Cldn1O88551 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.85□□□□□ -0.03
Cldn1O88551 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cldn1O88551 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.85□□□□□ -0.03
Cldn1O88551 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldn1O88551 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cldn1O88551 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.84□□□□□ -0.03
Cldn1O88551 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Cldn1O88551 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.84□□□□□ -0.03
Cldn1O88551 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.84□□□□□ -0.03
Cldn1O88551 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Cldn1O88551 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cldn1O88551 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cldn1O88551 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cldn1O88551 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cldn1O88551 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Cldn1O88551 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cldn1O88551 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cldn1O88551 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldn1O88551 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldn1O88551 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldn1O88551 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cldn1O88551 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.83□□□□□ -0.04
Cldn1O88551 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldn1O88551 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cldn1O88551 Gm16061-201ENSMUST00000122167 857 ntBASIC14.83□□□□□ -0.04
Cldn1O88551 Gm5587-201ENSMUST00000206270 674 ntBASIC14.83□□□□□ -0.04
Cldn1O88551 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.83□□□□□ -0.04
Cldn1O88551 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldn1O88551 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldn1O88551 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.83□□□□□ -0.04
Cldn1O88551 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldn1O88551 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldn1O88551 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldn1O88551 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.82□□□□□ -0.04
Cldn1O88551 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.82□□□□□ -0.04
Cldn1O88551 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cldn1O88551 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.82□□□□□ -0.04
Cldn1O88551 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
Cldn1O88551 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.82□□□□□ -0.04
Cldn1O88551 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cldn1O88551 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms