Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim3O70209 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim3O70209 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim3O70209 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim3O70209 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim3O70209 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim3O70209 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim3O70209 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim3O70209 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim3O70209 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim3O70209 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.76■□□□□ 0.11
Pdlim3O70209 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pdlim3O70209 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.76■□□□□ 0.11
Pdlim3O70209 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim3O70209 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pdlim3O70209 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.76■□□□□ 0.11
Pdlim3O70209 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim3O70209 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim3O70209 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pdlim3O70209 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim3O70209 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim3O70209 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim3O70209 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim3O70209 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.75■□□□□ 0.11
Pdlim3O70209 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
Pdlim3O70209 Gm10033-202ENSMUST00000211874 928 ntBASIC15.75■□□□□ 0.11
Pdlim3O70209 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Pdlim3O70209 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pdlim3O70209 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim3O70209 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pdlim3O70209 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim3O70209 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim3O70209 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.74■□□□□ 0.11
Pdlim3O70209 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim3O70209 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.74■□□□□ 0.11
Pdlim3O70209 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim3O70209 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim3O70209 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim3O70209 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim3O70209 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pdlim3O70209 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim3O70209 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim3O70209 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim3O70209 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim3O70209 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pdlim3O70209 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.73■□□□□ 0.11
Pdlim3O70209 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Pdlim3O70209 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim3O70209 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.73■□□□□ 0.11
Pdlim3O70209 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pdlim3O70209 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pdlim3O70209 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Pdlim3O70209 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pdlim3O70209 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pdlim3O70209 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Gm2399-201ENSMUST00000104944 225 ntBASIC15.72■□□□□ 0.11
Pdlim3O70209 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.72■□□□□ 0.11
Pdlim3O70209 Gm18671-201ENSMUST00000214826 683 ntBASIC15.72■□□□□ 0.11
Pdlim3O70209 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.72■□□□□ 0.11
Pdlim3O70209 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Pdlim3O70209 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms