Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6dO55057 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6dO55057 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6dO55057 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pde6dO55057 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6dO55057 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pde6dO55057 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6dO55057 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6dO55057 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pde6dO55057 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pde6dO55057 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.74□□□□□ -0.21
Pde6dO55057 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
Pde6dO55057 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pde6dO55057 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pde6dO55057 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.73□□□□□ -0.21
Pde6dO55057 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pde6dO55057 Gm22325-201ENSMUST00000158904 308 ntBASIC13.73□□□□□ -0.21
Pde6dO55057 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.73□□□□□ -0.21
Pde6dO55057 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pde6dO55057 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pde6dO55057 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.72□□□□□ -0.21
Pde6dO55057 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.72□□□□□ -0.21
Pde6dO55057 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.72□□□□□ -0.21
Pde6dO55057 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.72□□□□□ -0.21
Pde6dO55057 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pde6dO55057 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.72□□□□□ -0.21
Pde6dO55057 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6dO55057 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6dO55057 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6dO55057 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Pde6dO55057 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6dO55057 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6dO55057 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Pde6dO55057 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6dO55057 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Pde6dO55057 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6dO55057 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pde6dO55057 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pde6dO55057 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.71□□□□□ -0.22
Pde6dO55057 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pde6dO55057 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pde6dO55057 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pde6dO55057 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Pde6dO55057 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pde6dO55057 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pde6dO55057 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pde6dO55057 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6dO55057 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6dO55057 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6dO55057 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6dO55057 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6dO55057 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pde6dO55057 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms