Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trdmt1O55055 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trdmt1O55055 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trdmt1O55055 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trdmt1O55055 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trdmt1O55055 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trdmt1O55055 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trdmt1O55055 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trdmt1O55055 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trdmt1O55055 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.15■□□□□ 0.66
Trdmt1O55055 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Trdmt1O55055 Gm7153-201ENSMUST00000117092 455 ntBASIC19.15■□□□□ 0.66
Trdmt1O55055 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.15■□□□□ 0.66
Trdmt1O55055 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trdmt1O55055 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Trdmt1O55055 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trdmt1O55055 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trdmt1O55055 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trdmt1O55055 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trdmt1O55055 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trdmt1O55055 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trdmt1O55055 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trdmt1O55055 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trdmt1O55055 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trdmt1O55055 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trdmt1O55055 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Trdmt1O55055 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trdmt1O55055 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.14■□□□□ 0.65
Trdmt1O55055 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trdmt1O55055 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trdmt1O55055 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trdmt1O55055 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trdmt1O55055 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trdmt1O55055 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trdmt1O55055 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trdmt1O55055 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.13■□□□□ 0.65
Trdmt1O55055 Gm45328-201ENSMUST00000210942 917 ntBASIC19.13■□□□□ 0.65
Trdmt1O55055 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trdmt1O55055 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Trdmt1O55055 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trdmt1O55055 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trdmt1O55055 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trdmt1O55055 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trdmt1O55055 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trdmt1O55055 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.12■□□□□ 0.65
Trdmt1O55055 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trdmt1O55055 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.12■□□□□ 0.65
Trdmt1O55055 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.12■□□□□ 0.65
Trdmt1O55055 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.12■□□□□ 0.65
Trdmt1O55055 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 Gm7461-201ENSMUST00000058918 827 ntBASIC19.12■□□□□ 0.65
Trdmt1O55055 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trdmt1O55055 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trdmt1O55055 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trdmt1O55055 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trdmt1O55055 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.11■□□□□ 0.65
Trdmt1O55055 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trdmt1O55055 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trdmt1O55055 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trdmt1O55055 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trdmt1O55055 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trdmt1O55055 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trdmt1O55055 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trdmt1O55055 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trdmt1O55055 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trdmt1O55055 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.11■□□□□ 0.65
Trdmt1O55055 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trdmt1O55055 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trdmt1O55055 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.1■□□□□ 0.65
Trdmt1O55055 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trdmt1O55055 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trdmt1O55055 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trdmt1O55055 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trdmt1O55055 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trdmt1O55055 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.1■□□□□ 0.65
Trdmt1O55055 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.1■□□□□ 0.65
Trdmt1O55055 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trdmt1O55055 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.1■□□□□ 0.65
Trdmt1O55055 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trdmt1O55055 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trdmt1O55055 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trdmt1O55055 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trdmt1O55055 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
Trdmt1O55055 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trdmt1O55055 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trdmt1O55055 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trdmt1O55055 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trdmt1O55055 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trdmt1O55055 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms