Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SncaO55042 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.4□□□□□ -0.1
SncaO55042 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.4□□□□□ -0.1
SncaO55042 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SncaO55042 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SncaO55042 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SncaO55042 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.4□□□□□ -0.1
SncaO55042 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.39□□□□□ -0.11
SncaO55042 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SncaO55042 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.39□□□□□ -0.11
SncaO55042 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SncaO55042 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SncaO55042 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SncaO55042 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SncaO55042 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SncaO55042 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
SncaO55042 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.38□□□□□ -0.11
SncaO55042 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SncaO55042 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.38□□□□□ -0.11
SncaO55042 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SncaO55042 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.38□□□□□ -0.11
SncaO55042 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SncaO55042 Gm7290-201ENSMUST00000104990 617 ntBASIC14.38□□□□□ -0.11
SncaO55042 Gm12918-201ENSMUST00000120234 636 ntBASIC14.38□□□□□ -0.11
SncaO55042 Gm15710-201ENSMUST00000121821 636 ntBASIC14.38□□□□□ -0.11
SncaO55042 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SncaO55042 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SncaO55042 Gm5075-201ENSMUST00000196916 622 ntBASIC14.38□□□□□ -0.11
SncaO55042 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SncaO55042 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SncaO55042 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.38□□□□□ -0.11
SncaO55042 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.38□□□□□ -0.11
SncaO55042 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SncaO55042 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SncaO55042 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SncaO55042 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SncaO55042 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SncaO55042 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.37□□□□□ -0.11
SncaO55042 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.37□□□□□ -0.11
SncaO55042 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
SncaO55042 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
SncaO55042 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SncaO55042 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.37□□□□□ -0.11
SncaO55042 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.37□□□□□ -0.11
SncaO55042 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.37□□□□□ -0.11
SncaO55042 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SncaO55042 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SncaO55042 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SncaO55042 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.37□□□□□ -0.11
SncaO55042 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SncaO55042 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SncaO55042 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SncaO55042 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SncaO55042 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SncaO55042 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
SncaO55042 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SncaO55042 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SncaO55042 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SncaO55042 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SncaO55042 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.36□□□□□ -0.11
SncaO55042 Gm2399-201ENSMUST00000104944 225 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms