Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.5■□□□□ 0.55
Kcnu1O54982 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Kcnu1O54982 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Kcnu1O54982 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kcnu1O54982 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kcnu1O54982 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kcnu1O54982 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kcnu1O54982 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Kcnu1O54982 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Kcnu1O54982 Gm29257-201ENSMUST00000186115 639 ntBASIC18.5■□□□□ 0.55
Kcnu1O54982 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.5■□□□□ 0.55
Kcnu1O54982 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Kcnu1O54982 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Kcnu1O54982 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.49■□□□□ 0.55
Kcnu1O54982 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Kcnu1O54982 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Kcnu1O54982 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.49■□□□□ 0.55
Kcnu1O54982 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kcnu1O54982 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kcnu1O54982 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kcnu1O54982 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Kcnu1O54982 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.49■□□□□ 0.55
Kcnu1O54982 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.49■□□□□ 0.55
Kcnu1O54982 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kcnu1O54982 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.49■□□□□ 0.55
Kcnu1O54982 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Kcnu1O54982 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.49■□□□□ 0.55
Kcnu1O54982 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kcnu1O54982 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Kcnu1O54982 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kcnu1O54982 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kcnu1O54982 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kcnu1O54982 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kcnu1O54982 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kcnu1O54982 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kcnu1O54982 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.48■□□□□ 0.55
Kcnu1O54982 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Kcnu1O54982 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.48■□□□□ 0.55
Kcnu1O54982 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
Kcnu1O54982 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Kcnu1O54982 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kcnu1O54982 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kcnu1O54982 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kcnu1O54982 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Kcnu1O54982 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Kcnu1O54982 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kcnu1O54982 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Kcnu1O54982 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kcnu1O54982 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.47■□□□□ 0.55
Kcnu1O54982 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Kcnu1O54982 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kcnu1O54982 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.47■□□□□ 0.55
Kcnu1O54982 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kcnu1O54982 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kcnu1O54982 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Kcnu1O54982 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kcnu1O54982 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kcnu1O54982 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kcnu1O54982 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.46■□□□□ 0.55
Kcnu1O54982 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Kcnu1O54982 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.46■□□□□ 0.55
Kcnu1O54982 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kcnu1O54982 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.46■□□□□ 0.55
Kcnu1O54982 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.46■□□□□ 0.55
Kcnu1O54982 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Kcnu1O54982 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kcnu1O54982 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Kcnu1O54982 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Kcnu1O54982 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Kcnu1O54982 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Kcnu1O54982 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Kcnu1O54982 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.45■□□□□ 0.54
Kcnu1O54982 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Kcnu1O54982 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.45■□□□□ 0.54
Kcnu1O54982 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Kcnu1O54982 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.45■□□□□ 0.54
Kcnu1O54982 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Kcnu1O54982 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Kcnu1O54982 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Kcnu1O54982 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Kcnu1O54982 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Kcnu1O54982 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Kcnu1O54982 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Kcnu1O54982 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Kcnu1O54982 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Kcnu1O54982 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Kcnu1O54982 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms