Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Per1O35973 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Per1O35973 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Per1O35973 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Per1O35973 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Per1O35973 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Per1O35973 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Per1O35973 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Per1O35973 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Per1O35973 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Per1O35973 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Per1O35973 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Per1O35973 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Per1O35973 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.86■□□□□ 0.61
Per1O35973 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Per1O35973 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Per1O35973 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Per1O35973 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.86■□□□□ 0.61
Per1O35973 Gm7977-201ENSMUST00000193787 748 ntBASIC18.86■□□□□ 0.61
Per1O35973 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Per1O35973 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Per1O35973 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Per1O35973 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Per1O35973 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Per1O35973 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Per1O35973 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Per1O35973 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.85■□□□□ 0.61
Per1O35973 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Per1O35973 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Per1O35973 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Per1O35973 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Per1O35973 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.85■□□□□ 0.61
Per1O35973 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Per1O35973 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Per1O35973 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Per1O35973 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.85■□□□□ 0.61
Per1O35973 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Per1O35973 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.85■□□□□ 0.61
Per1O35973 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Per1O35973 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Per1O35973 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.85■□□□□ 0.61
Per1O35973 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Per1O35973 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Per1O35973 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.84■□□□□ 0.61
Per1O35973 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Per1O35973 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.84■□□□□ 0.61
Per1O35973 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Per1O35973 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Per1O35973 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Per1O35973 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.84■□□□□ 0.61
Per1O35973 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Per1O35973 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Per1O35973 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Per1O35973 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Per1O35973 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Per1O35973 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Per1O35973 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.84■□□□□ 0.61
Per1O35973 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Per1O35973 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Per1O35973 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Per1O35973 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.84■□□□□ 0.61
Per1O35973 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Per1O35973 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Per1O35973 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Per1O35973 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Per1O35973 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Per1O35973 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Per1O35973 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
Per1O35973 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.83■□□□□ 0.6
Per1O35973 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Per1O35973 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.83■□□□□ 0.6
Per1O35973 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.83■□□□□ 0.6
Per1O35973 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Per1O35973 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Per1O35973 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Per1O35973 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Per1O35973 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Per1O35973 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Per1O35973 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Per1O35973 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Per1O35973 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Per1O35973 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Per1O35973 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Per1O35973 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Per1O35973 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Per1O35973 Mir1668-201ENSMUST00000184114 107 ntBASIC18.81■□□□□ 0.6
Per1O35973 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Per1O35973 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Per1O35973 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Per1O35973 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.81■□□□□ 0.6
Per1O35973 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Per1O35973 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Per1O35973 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Per1O35973 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Per1O35973 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Per1O35973 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Per1O35973 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Per1O35973 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Per1O35973 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.8■□□□□ 0.6
Per1O35973 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms