Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC22.32■■□□□ 1.16
Col15a1O35206 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Col15a1O35206 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col15a1O35206 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col15a1O35206 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col15a1O35206 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col15a1O35206 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col15a1O35206 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col15a1O35206 Zkscan4-202ENSMUST00000225845 1506 ntBASIC22.31■■□□□ 1.16
Col15a1O35206 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col15a1O35206 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col15a1O35206 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC22.31■■□□□ 1.16
Col15a1O35206 Gm27000-201ENSMUST00000182943 842 ntBASIC22.31■■□□□ 1.16
Col15a1O35206 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC22.31■■□□□ 1.16
Col15a1O35206 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC22.31■■□□□ 1.16
Col15a1O35206 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col15a1O35206 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col15a1O35206 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col15a1O35206 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col15a1O35206 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col15a1O35206 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col15a1O35206 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC22.31■■□□□ 1.16
Col15a1O35206 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col15a1O35206 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col15a1O35206 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Col15a1O35206 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC22.3■■□□□ 1.16
Col15a1O35206 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col15a1O35206 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC22.3■■□□□ 1.16
Col15a1O35206 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
Col15a1O35206 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
Col15a1O35206 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
Col15a1O35206 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col15a1O35206 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
Col15a1O35206 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col15a1O35206 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col15a1O35206 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Col15a1O35206 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col15a1O35206 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col15a1O35206 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Col15a1O35206 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col15a1O35206 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col15a1O35206 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC22.29■■□□□ 1.16
Col15a1O35206 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col15a1O35206 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC22.29■■□□□ 1.16
Col15a1O35206 Mzt1-203ENSMUST00000227948 952 ntBASIC22.29■■□□□ 1.16
Col15a1O35206 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col15a1O35206 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col15a1O35206 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Col15a1O35206 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col15a1O35206 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.29■■□□□ 1.16
Col15a1O35206 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col15a1O35206 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col15a1O35206 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col15a1O35206 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Col15a1O35206 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col15a1O35206 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col15a1O35206 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Col15a1O35206 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Col15a1O35206 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col15a1O35206 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Col15a1O35206 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC22.28■■□□□ 1.16
Col15a1O35206 Dmtn-210ENSMUST00000228824 2377 ntBASIC22.28■■□□□ 1.16
Col15a1O35206 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col15a1O35206 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Col15a1O35206 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC22.27■■□□□ 1.16
Col15a1O35206 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col15a1O35206 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Col15a1O35206 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC22.27■■□□□ 1.16
Col15a1O35206 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col15a1O35206 AC164629.2-201ENSMUST00000217916 270 ntBASIC22.27■■□□□ 1.16
Col15a1O35206 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col15a1O35206 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Col15a1O35206 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
Col15a1O35206 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Col15a1O35206 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Col15a1O35206 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
Col15a1O35206 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col15a1O35206 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC22.26■■□□□ 1.15
Col15a1O35206 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col15a1O35206 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC22.26■■□□□ 1.15
Col15a1O35206 AC124569.2-201ENSMUST00000225998 818 ntBASIC22.26■■□□□ 1.15
Col15a1O35206 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col15a1O35206 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col15a1O35206 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col15a1O35206 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col15a1O35206 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col15a1O35206 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC22.25■■□□□ 1.15
Col15a1O35206 Gm27459-201ENSMUST00000184860 107 ntBASIC22.25■■□□□ 1.15
Col15a1O35206 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col15a1O35206 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Col15a1O35206 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col15a1O35206 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col15a1O35206 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col15a1O35206 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col15a1O35206 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC22.25■■□□□ 1.15
Col15a1O35206 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col15a1O35206 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Col15a1O35206 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Col15a1O35206 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Col15a1O35206 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms