Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.51■□□□□ 0.07
Raet1cO08604 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.51■□□□□ 0.07
Raet1cO08604 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Raet1cO08604 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Gm6576-201ENSMUST00000169678 883 ntBASIC15.51■□□□□ 0.07
Raet1cO08604 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.51■□□□□ 0.07
Raet1cO08604 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.51■□□□□ 0.07
Raet1cO08604 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Raet1cO08604 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Raet1cO08604 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Raet1cO08604 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Raet1cO08604 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1cO08604 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.51■□□□□ 0.07
Raet1cO08604 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Raet1cO08604 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Raet1cO08604 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Raet1cO08604 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.5■□□□□ 0.07
Raet1cO08604 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.5■□□□□ 0.07
Raet1cO08604 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.5■□□□□ 0.07
Raet1cO08604 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.5■□□□□ 0.07
Raet1cO08604 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.5■□□□□ 0.07
Raet1cO08604 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Raet1cO08604 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Raet1cO08604 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Raet1cO08604 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.5■□□□□ 0.07
Raet1cO08604 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1cO08604 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.49■□□□□ 0.07
Raet1cO08604 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Raet1cO08604 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Gm10653-202ENSMUST00000139570 835 ntBASIC15.49■□□□□ 0.07
Raet1cO08604 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.49■□□□□ 0.07
Raet1cO08604 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.49■□□□□ 0.07
Raet1cO08604 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.49■□□□□ 0.07
Raet1cO08604 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.49■□□□□ 0.07
Raet1cO08604 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.49■□□□□ 0.07
Raet1cO08604 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.49■□□□□ 0.07
Raet1cO08604 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Raet1cO08604 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Raet1cO08604 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Raet1cO08604 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Raet1cO08604 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Raet1cO08604 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Raet1cO08604 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Raet1cO08604 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.48■□□□□ 0.07
Raet1cO08604 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Raet1cO08604 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Raet1cO08604 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Raet1cO08604 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.48■□□□□ 0.07
Raet1cO08604 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.48■□□□□ 0.07
Raet1cO08604 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.48■□□□□ 0.07
Raet1cO08604 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Raet1cO08604 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Raet1cO08604 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms