Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.4■□□□□ 0.06
Raet1bO08603 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Raet1bO08603 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.4■□□□□ 0.06
Raet1bO08603 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.4■□□□□ 0.06
Raet1bO08603 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Raet1bO08603 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1bO08603 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1bO08603 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1bO08603 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1bO08603 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1bO08603 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1bO08603 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Raet1bO08603 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1bO08603 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1bO08603 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1bO08603 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.39■□□□□ 0.05
Raet1bO08603 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1bO08603 Gm20760-201ENSMUST00000179197 648 ntBASIC15.39■□□□□ 0.05
Raet1bO08603 Gm43183-201ENSMUST00000200632 547 ntBASIC15.39■□□□□ 0.05
Raet1bO08603 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1bO08603 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.39■□□□□ 0.05
Raet1bO08603 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Raet1bO08603 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1bO08603 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Raet1bO08603 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Raet1bO08603 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Raet1bO08603 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Raet1bO08603 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.38■□□□□ 0.05
Raet1bO08603 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1bO08603 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Raet1bO08603 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Raet1bO08603 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Raet1bO08603 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Raet1bO08603 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Raet1bO08603 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Gm15378-201ENSMUST00000121894 207 ntBASIC15.37■□□□□ 0.05
Raet1bO08603 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.37■□□□□ 0.05
Raet1bO08603 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Raet1bO08603 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Raet1bO08603 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Raet1bO08603 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1bO08603 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1bO08603 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1bO08603 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.36■□□□□ 0.05
Raet1bO08603 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Raet1bO08603 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1bO08603 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Raet1bO08603 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1bO08603 Gm10698-201ENSMUST00000182663 604 ntBASIC15.36■□□□□ 0.05
Raet1bO08603 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1bO08603 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1bO08603 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1bO08603 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Raet1bO08603 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1bO08603 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1bO08603 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms