Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Raet1aO08602 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Raet1aO08602 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Raet1aO08602 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.4■□□□□ 0.06
Raet1aO08602 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Raet1aO08602 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.4■□□□□ 0.06
Raet1aO08602 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.4■□□□□ 0.06
Raet1aO08602 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Raet1aO08602 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Raet1aO08602 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Raet1aO08602 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.39■□□□□ 0.05
Raet1aO08602 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 Gm20760-201ENSMUST00000179197 648 ntBASIC15.39■□□□□ 0.05
Raet1aO08602 Gm43183-201ENSMUST00000200632 547 ntBASIC15.39■□□□□ 0.05
Raet1aO08602 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.39■□□□□ 0.05
Raet1aO08602 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Raet1aO08602 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Raet1aO08602 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Raet1aO08602 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Raet1aO08602 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.38■□□□□ 0.05
Raet1aO08602 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Raet1aO08602 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.38■□□□□ 0.05
Raet1aO08602 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Raet1aO08602 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Raet1aO08602 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Raet1aO08602 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Raet1aO08602 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Raet1aO08602 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Gm15378-201ENSMUST00000121894 207 ntBASIC15.37■□□□□ 0.05
Raet1aO08602 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.37■□□□□ 0.05
Raet1aO08602 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Raet1aO08602 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Raet1aO08602 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Raet1aO08602 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1aO08602 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1aO08602 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.36■□□□□ 0.05
Raet1aO08602 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1aO08602 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Raet1aO08602 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1aO08602 Gm10698-201ENSMUST00000182663 604 ntBASIC15.36■□□□□ 0.05
Raet1aO08602 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1aO08602 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms