Protein–RNA interactions for Protein: O08585

Clta, Clathrin light chain A, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CltaO08585 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CltaO08585 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CltaO08585 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.28■■□□□ 1
CltaO08585 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.28■■□□□ 1
CltaO08585 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CltaO08585 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CltaO08585 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CltaO08585 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CltaO08585 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CltaO08585 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CltaO08585 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CltaO08585 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CltaO08585 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CltaO08585 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.27■■□□□ 1
CltaO08585 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CltaO08585 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CltaO08585 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CltaO08585 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CltaO08585 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CltaO08585 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CltaO08585 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CltaO08585 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC21.26■□□□□ 0.99
CltaO08585 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.26■□□□□ 0.99
CltaO08585 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CltaO08585 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CltaO08585 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CltaO08585 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CltaO08585 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CltaO08585 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CltaO08585 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.26■□□□□ 0.99
CltaO08585 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CltaO08585 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CltaO08585 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CltaO08585 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CltaO08585 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CltaO08585 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CltaO08585 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CltaO08585 Mir8112-201ENSMUST00000184382 131 ntBASIC21.25■□□□□ 0.99
CltaO08585 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.25■□□□□ 0.99
CltaO08585 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CltaO08585 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CltaO08585 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CltaO08585 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CltaO08585 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CltaO08585 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CltaO08585 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CltaO08585 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CltaO08585 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CltaO08585 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CltaO08585 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC21.24■□□□□ 0.99
CltaO08585 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CltaO08585 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CltaO08585 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CltaO08585 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CltaO08585 Gm45328-201ENSMUST00000210942 917 ntBASIC21.24■□□□□ 0.99
CltaO08585 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CltaO08585 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CltaO08585 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CltaO08585 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
CltaO08585 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CltaO08585 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CltaO08585 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CltaO08585 Olfr129-201ENSMUST00000122318 993 ntBASIC21.23■□□□□ 0.99
CltaO08585 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CltaO08585 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CltaO08585 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CltaO08585 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CltaO08585 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC21.23■□□□□ 0.99
CltaO08585 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.23■□□□□ 0.99
CltaO08585 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CltaO08585 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CltaO08585 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CltaO08585 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CltaO08585 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.23■□□□□ 0.99
CltaO08585 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CltaO08585 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CltaO08585 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CltaO08585 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CltaO08585 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CltaO08585 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.23■□□□□ 0.99
CltaO08585 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.23■□□□□ 0.99
CltaO08585 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CltaO08585 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CltaO08585 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CltaO08585 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.22■□□□□ 0.99
CltaO08585 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CltaO08585 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CltaO08585 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CltaO08585 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CltaO08585 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CltaO08585 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CltaO08585 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CltaO08585 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CltaO08585 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CltaO08585 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CltaO08585 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CltaO08585 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CltaO08585 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CltaO08585 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CltaO08585 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms