Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Gm10418-201ENSMUST00000100943 576 ntBASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh1F7BJK1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Gm13216-201ENSMUST00000117145 591 ntBASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.64■□□□□ 0.09
Pcdh1F7BJK1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Zfp783-201ENSMUST00000095946 670 ntBASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh1F7BJK1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh1F7BJK1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh1F7BJK1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh1F7BJK1 Gm42569-201ENSMUST00000200539 472 ntBASIC15.62■□□□□ 0.09
Pcdh1F7BJK1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdh1F7BJK1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdh1F7BJK1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh1F7BJK1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh1F7BJK1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Gm2399-201ENSMUST00000104944 225 ntBASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Mir2861-201ENSMUST00000175539 82 ntBASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh1F7BJK1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Gm7291-201ENSMUST00000199147 382 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms