Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Gm13401-201ENSMUST00000117074 291 ntBASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Gm6659-201ENSMUST00000174752 547 ntBASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh17E9PXF0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Gm45058-201ENSMUST00000205810 766 ntBASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh17E9PXF0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh17E9PXF0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Gm29791-202ENSMUST00000207888 369 ntBASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh17E9PXF0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Gm2274-201ENSMUST00000184539 609 ntBASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Gm18032-201ENSMUST00000222541 538 ntBASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms