Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Hfm1D3Z4R1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Hfm1D3Z4R1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Hfm1D3Z4R1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Hfm1D3Z4R1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Hfm1D3Z4R1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC24.39■■□□□ 1.5
Hfm1D3Z4R1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Hfm1D3Z4R1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Hfm1D3Z4R1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Hfm1D3Z4R1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Hfm1D3Z4R1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Hfm1D3Z4R1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Hfm1D3Z4R1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Hfm1D3Z4R1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Hfm1D3Z4R1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Hfm1D3Z4R1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Hfm1D3Z4R1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Hfm1D3Z4R1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC24.38■■□□□ 1.49
Hfm1D3Z4R1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hfm1D3Z4R1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Hfm1D3Z4R1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hfm1D3Z4R1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hfm1D3Z4R1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hfm1D3Z4R1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hfm1D3Z4R1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hfm1D3Z4R1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hfm1D3Z4R1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC24.37■■□□□ 1.49
Hfm1D3Z4R1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Hfm1D3Z4R1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Hfm1D3Z4R1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Hfm1D3Z4R1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Hfm1D3Z4R1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Hfm1D3Z4R1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hfm1D3Z4R1 Gm7935-201ENSMUST00000100555 1278 ntBASIC24.36■■□□□ 1.49
Hfm1D3Z4R1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hfm1D3Z4R1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Hfm1D3Z4R1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Hfm1D3Z4R1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
Hfm1D3Z4R1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hfm1D3Z4R1 Gm12644-201ENSMUST00000119935 606 ntBASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Hfm1D3Z4R1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Hfm1D3Z4R1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Hfm1D3Z4R1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Hfm1D3Z4R1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Hfm1D3Z4R1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Hfm1D3Z4R1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Hfm1D3Z4R1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Hfm1D3Z4R1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Hfm1D3Z4R1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Hfm1D3Z4R1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC24.33■■□□□ 1.48
Hfm1D3Z4R1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Phf7-203ENSMUST00000226565 1971 ntBASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms