Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a6B1AVK5 Phf7-203ENSMUST00000226565 1971 ntBASIC17.92■□□□□ 0.46
Col4a6B1AVK5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Col4a6B1AVK5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a6B1AVK5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a6B1AVK5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a6B1AVK5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a6B1AVK5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a6B1AVK5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.92■□□□□ 0.46
Col4a6B1AVK5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a6B1AVK5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Gm6443-201ENSMUST00000203599 874 ntBASIC17.9■□□□□ 0.46
Col4a6B1AVK5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Col4a6B1AVK5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a6B1AVK5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a6B1AVK5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Col4a6B1AVK5 Gm44450-201ENSMUST00000199528 114 ntBASIC17.89■□□□□ 0.45
Col4a6B1AVK5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a6B1AVK5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a6B1AVK5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.89■□□□□ 0.45
Col4a6B1AVK5 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.89■□□□□ 0.45
Col4a6B1AVK5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a6B1AVK5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a6B1AVK5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a6B1AVK5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a6B1AVK5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a6B1AVK5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.88■□□□□ 0.45
Col4a6B1AVK5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.88■□□□□ 0.45
Col4a6B1AVK5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a6B1AVK5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a6B1AVK5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a6B1AVK5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a6B1AVK5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a6B1AVK5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Gm15372-201ENSMUST00000120729 834 ntBASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Gm43347-201ENSMUST00000200226 580 ntBASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Gm5864-201ENSMUST00000202263 970 ntBASIC17.87■□□□□ 0.45
Col4a6B1AVK5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a6B1AVK5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.86■□□□□ 0.45
Col4a6B1AVK5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a6B1AVK5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a6B1AVK5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a6B1AVK5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a6B1AVK5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a6B1AVK5 Gm18421-201ENSMUST00000204122 625 ntBASIC17.86■□□□□ 0.45
Col4a6B1AVK5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a6B1AVK5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.86■□□□□ 0.45
Col4a6B1AVK5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Col4a6B1AVK5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms