Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Col6a5A6H584 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col6a5A6H584 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Col6a5A6H584 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col6a5A6H584 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Col6a5A6H584 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a5A6H584 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a5A6H584 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a5A6H584 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a5A6H584 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a5A6H584 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a5A6H584 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a5A6H584 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col6a5A6H584 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a5A6H584 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.12□□□□□ -0.31
Col6a5A6H584 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Col6a5A6H584 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a5A6H584 Mir3113-201ENSMUST00000175478 76 ntBASIC13.12□□□□□ -0.31
Col6a5A6H584 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col6a5A6H584 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a5A6H584 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.12□□□□□ -0.31
Col6a5A6H584 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a5A6H584 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a5A6H584 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a5A6H584 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.11□□□□□ -0.31
Col6a5A6H584 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.11□□□□□ -0.31
Col6a5A6H584 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.11□□□□□ -0.31
Col6a5A6H584 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.11□□□□□ -0.31
Col6a5A6H584 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col6a5A6H584 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col6a5A6H584 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a5A6H584 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.1□□□□□ -0.31
Col6a5A6H584 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Col6a5A6H584 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col6a5A6H584 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col6a5A6H584 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Mir6956-201ENSMUST00000183598 62 ntBASIC13.1□□□□□ -0.31
Col6a5A6H584 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Col6a5A6H584 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.1□□□□□ -0.31
Col6a5A6H584 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Col6a5A6H584 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a5A6H584 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col6a5A6H584 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Gm7230-201ENSMUST00000173026 815 ntBASIC13.09□□□□□ -0.31
Col6a5A6H584 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.09□□□□□ -0.31
Col6a5A6H584 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col6a5A6H584 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.09□□□□□ -0.31
Col6a5A6H584 Gm27000-201ENSMUST00000182943 842 ntBASIC13.09□□□□□ -0.31
Col6a5A6H584 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms