Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Igkv3-5A0A140T8M6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Igkv3-5A0A140T8M6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv3-5A0A140T8M6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Gm38345-201ENSMUST00000192635 1748 ntBASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Gm43672-201ENSMUST00000199072 1731 ntBASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-5A0A140T8M6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC10.94□□□□□ -0.66
Igkv3-5A0A140T8M6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 AV356131-201ENSMUST00000206201 750 ntBASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv3-5A0A140T8M6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms