Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm44544-201ENSMUST00000207052 1844 ntBASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm18671-201ENSMUST00000214826 683 ntBASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-4A0A0G2JFX3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms