Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm21956-201ENSMUST00000179946 522 ntBASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.15□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav3n-3A0A0G2JEM0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms