Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Mir1668-201ENSMUST00000184114 107 ntBASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Gm22697-201ENSMUST00000175194 63 ntBASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Gm18101-201ENSMUST00000215769 548 ntBASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Gm7213-201ENSMUST00000215977 950 ntBASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm27000-201ENSMUST00000182943 842 ntBASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm10566-201ENSMUST00000086739 996 ntBASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms