Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv5A0A0B4J1G9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Gm9847-201ENSMUST00000052528 599 ntBASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv5A0A0B4J1G9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trbv5A0A0B4J1G9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms