Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gm23634-201ENSMUST00000175071 91 ntBASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-43A0A0A6YXN5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.02■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.02■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Mir1668-201ENSMUST00000184114 107 ntBASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Gm5828-201ENSMUST00000071842 1860 ntBASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.99■□□□□ 0.15
Ighv1-43A0A0A6YXN5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-43A0A0A6YXN5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms