Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Gm7291-201ENSMUST00000199147 382 ntBASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Gm29791-202ENSMUST00000207888 369 ntBASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Gm10418-201ENSMUST00000100943 576 ntBASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Gm6211-202ENSMUST00000167849 925 ntBASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Ighv1-56A0A0A6YXG2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms