Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm7153-201ENSMUST00000117092 455 ntBASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm6623-201ENSMUST00000173570 544 ntBASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm7461-201ENSMUST00000058918 827 ntBASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Golph3-205ENSMUST00000228671 2842 ntBASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gm18958-201ENSMUST00000174258 762 ntBASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gm10566-201ENSMUST00000086739 996 ntBASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms