Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-4A0A075B6B4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-4A0A075B6B4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Gm10517-202ENSMUST00000192970 758 ntBASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Gm4974-201ENSMUST00000209974 875 ntBASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav6-4A0A075B6B4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms