Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav9d-3A0A075B695 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Gm12896-201ENSMUST00000118430 226 ntBASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Mtag2-201ENSMUST00000058665 714 ntBASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-3A0A075B695 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-3A0A075B695 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Gm29791-202ENSMUST00000207888 369 ntBASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Trav9d-3A0A075B695 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.38□□□□□ -0.43
Trav9d-3A0A075B695 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-3A0A075B695 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-3A0A075B695 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-3A0A075B695 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-3A0A075B695 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav9d-3A0A075B695 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-3A0A075B695 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-3A0A075B695 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms