Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Gm7514-201ENSMUST00000209475 934 ntBASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-2-dv6-2A0A075B650 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms