Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav8-1A0A075B641 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav8-1A0A075B641 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Tgds-204ENSMUST00000228543 1594 ntBASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8-1A0A075B641 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms