Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-6A0A075B640 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-6A0A075B640 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-6A0A075B640 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-6A0A075B640 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-6A0A075B640 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-6A0A075B640 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav7-6A0A075B640 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Gm10033-202ENSMUST00000211874 928 ntBASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-6A0A075B640 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Gm5874-201ENSMUST00000096101 508 ntBASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-6A0A075B640 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms