Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gm18025-201ENSMUST00000221733 862 ntBASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-7-dv9A0A075B639 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.06
Trav6-7-dv9A0A075B639 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gm27275-201ENSMUST00000184318 272 ntBASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.39■□□□□ 0.05
Trav6-7-dv9A0A075B639 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-7-dv9A0A075B639 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms