Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trav16d-dv11A0A075B617 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav16d-dv11A0A075B617 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Trav16d-dv11A0A075B617 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16d-dv11A0A075B617 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16d-dv11A0A075B617 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16d-dv11A0A075B617 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Gm12251-201ENSMUST00000117893 792 ntBASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav16d-dv11A0A075B617 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16d-dv11A0A075B617 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav16d-dv11A0A075B617 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav16d-dv11A0A075B617 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav16d-dv11A0A075B617 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav16d-dv11A0A075B617 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms