Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav4n-4A0A075B615 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.47
Trav4n-4A0A075B615 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.08□□□□□ -0.47
Trav4n-4A0A075B615 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav4n-4A0A075B615 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav4n-4A0A075B615 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Gm13238-201ENSMUST00000117655 780 ntBASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav4n-4A0A075B615 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav4n-4A0A075B615 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4n-4A0A075B615 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms