Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Gm37292-201ENSMUST00000192062 758 ntBASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav1A0A075B5Z4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Gm18666-201ENSMUST00000190039 958 ntBASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Gm4974-201ENSMUST00000209974 875 ntBASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.13■□□□□ 0.17
Trav1A0A075B5Z4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav1A0A075B5Z4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav1A0A075B5Z4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav1A0A075B5Z4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav1A0A075B5Z4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Trav1A0A075B5Z4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav1A0A075B5Z4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav1A0A075B5Z4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.12■□□□□ 0.17
Trav1A0A075B5Z4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Trav1A0A075B5Z4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav1A0A075B5Z4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav1A0A075B5Z4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav1A0A075B5Z4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav1A0A075B5Z4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Gm12527-201ENSMUST00000117967 564 ntBASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Gm12382-201ENSMUST00000122005 922 ntBASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Gm37856-201ENSMUST00000191634 999 ntBASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms