Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm14591-201ENSMUST00000120407 518 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm15309-201ENSMUST00000121644 240 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm23465-201ENSMUST00000157134 262 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm3084-201ENSMUST00000169967 598 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Mir6414-201ENSMUST00000183685 82 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm28596-201ENSMUST00000185870 696 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm29484-201ENSMUST00000186067 324 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm28660-201ENSMUST00000186496 253 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm29196-201ENSMUST00000189239 618 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm32295-201ENSMUST00000192558 696 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm31260-201ENSMUST00000193478 696 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm43144-201ENSMUST00000198256 485 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Ighv1-68-201ENSMUST00000198789 294 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm43578-201ENSMUST00000201250 459 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm33626-201ENSMUST00000206790 828 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm35262-201ENSMUST00000215133 267 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Mecom-201ENSMUST00000061088 348 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ushbp1Q8R370 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.15□□□□□ -1.58
Ushbp1Q8R370 AC126673.3-201ENSMUST00000223414 3829 ntBASIC5.15□□□□□ -1.58
Ushbp1Q8R370 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Ushbp1Q8R370 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Ushbp1Q8R370 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Ushbp1Q8R370 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Ushbp1Q8R370 Gm7974-201ENSMUST00000117154 408 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm11869-201ENSMUST00000118701 329 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm12994-201ENSMUST00000119601 447 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm13170-201ENSMUST00000119716 643 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm13232-201ENSMUST00000121816 632 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm15075-201ENSMUST00000122187 477 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm24289-201ENSMUST00000157629 135 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm23352-201ENSMUST00000158428 64 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm26362-201ENSMUST00000158865 315 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm20428-201ENSMUST00000174365 283 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm18396-201ENSMUST00000177095 361 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Mir3620-201ENSMUST00000184710 61 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm27919-201ENSMUST00000185163 107 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm5252-201ENSMUST00000189030 909 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 AC167977.1-201ENSMUST00000221384 234 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm6065-201ENSMUST00000081336 492 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm23447-201ENSMUST00000082798 163 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm22287-201ENSMUST00000083197 107 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm6043-201ENSMUST00000099961 492 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.15□□□□□ -1.59
Ushbp1Q8R370 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ushbp1Q8R370 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm37862-201ENSMUST00000193079 2533 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Mir761-201ENSMUST00000103245 76 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm23709-201ENSMUST00000104364 130 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms