Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm29370-202ENSMUST00000187476 499 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm5551-201ENSMUST00000199720 690 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col1a1P11087 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col1a1P11087 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col1a1P11087 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Col1a1P11087 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col1a1P11087 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm38269-201ENSMUST00000194549 3298 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col1a1P11087 Gm26423-201ENSMUST00000104277 128 ntBASIC3.8□□□□□ -1.8
Col1a1P11087 Gm5123-201ENSMUST00000121905 837 ntBASIC3.8□□□□□ -1.8
Col1a1P11087 Gm5755-201ENSMUST00000152394 837 ntBASIC3.8□□□□□ -1.8
Col1a1P11087 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.8□□□□□ -1.8
Col1a1P11087 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Col1a1P11087 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.8□□□□□ -1.8
Col1a1P11087 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col1a1P11087 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col1a1P11087 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.8□□□□□ -1.8
Col1a1P11087 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.8□□□□□ -1.8
Col1a1P11087 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col1a1P11087 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
Col1a1P11087 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col1a1P11087 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.8□□□□□ -1.8
Col1a1P11087 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col1a1P11087 Gm336-201ENSMUST00000186376 1480 ntBASIC3.8□□□□□ -1.8
Col1a1P11087 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col1a1P11087 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Col1a1P11087 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col1a1P11087 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col1a1P11087 Gm28118-201ENSMUST00000185957 294 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Gm37996-201ENSMUST00000191859 367 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Gm32222-201ENSMUST00000203296 298 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col1a1P11087 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col1a1P11087 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col1a1P11087 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col1a1P11087 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col1a1P11087 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col1a1P11087 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col1a1P11087 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.79□□□□□ -1.8
Col1a1P11087 Gm12568-201ENSMUST00000117362 624 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Gm12261-201ENSMUST00000117499 645 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Gm13379-201ENSMUST00000118053 621 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Gm14649-201ENSMUST00000121814 324 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col1a1P11087 Gm10075-201ENSMUST00000162030 545 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Gm22908-201ENSMUST00000177620 110 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Gm21827-201ENSMUST00000178247 423 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Gm19039-201ENSMUST00000204363 575 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 Gm8319-201ENSMUST00000205708 641 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col1a1P11087 Gm18387-201ENSMUST00000220333 702 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.79□□□□□ -1.8
Col1a1P11087 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col1a1P11087 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col1a1P11087 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col1a1P11087 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col1a1P11087 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col1a1P11087 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Col1a1P11087 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col1a1P11087 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col1a1P11087 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col1a1P11087 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm22532-201ENSMUST00000158822 140 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm29320-201ENSMUST00000185235 615 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm28094-201ENSMUST00000185262 390 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm29179-202ENSMUST00000186138 615 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm28598-201ENSMUST00000186490 615 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm29448-201ENSMUST00000186675 615 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm29314-201ENSMUST00000186800 615 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.78□□□□□ -1.8
Col1a1P11087 Gm28253-202ENSMUST00000187971 615 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.78□□□□□ -1.8
Col1a1P11087 Gm29268-201ENSMUST00000188669 615 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.78□□□□□ -1.8
Col1a1P11087 Gm29169-201ENSMUST00000189835 615 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col1a1P11087 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.78□□□□□ -1.8
Col1a1P11087 Gm28978-201ENSMUST00000191120 615 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm37172-201ENSMUST00000191926 615 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Gm18388-201ENSMUST00000222339 557 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 AC166358.4-201ENSMUST00000223030 105 ntBASIC3.78□□□□□ -1.8
Col1a1P11087 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col1a1P11087 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Col1a1P11087 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms