Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm15095-201ENSMUST00000118996 1430 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm25096-201ENSMUST00000104043 129 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm14125-201ENSMUST00000113442 680 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm24275-201ENSMUST00000116780 146 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm15670-201ENSMUST00000117740 447 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm12095-201ENSMUST00000121962 816 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm23318-201ENSMUST00000158000 108 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm24944-201ENSMUST00000158330 128 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm23115-201ENSMUST00000158480 108 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm25365-201ENSMUST00000158852 121 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm26988-201ENSMUST00000183296 945 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim56Q80VI1 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm46193-201ENSMUST00000219399 364 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm5045-201ENSMUST00000027054 810 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim56Q80VI1 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim56Q80VI1 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim56Q80VI1 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.85□□□□□ -1.47
Trim56Q80VI1 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm22656-201ENSMUST00000104199 171 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm24160-201ENSMUST00000104594 126 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm14385-201ENSMUST00000116315 876 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Mir669g-201ENSMUST00000116809 123 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm8145-201ENSMUST00000118220 745 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm15381-201ENSMUST00000121501 1156 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm13214-201ENSMUST00000122137 408 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm25292-201ENSMUST00000122797 322 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm22563-201ENSMUST00000157333 269 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm15914-201ENSMUST00000161922 309 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Ear-ps3-201ENSMUST00000168308 445 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm22355-201ENSMUST00000175531 96 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm25194-201ENSMUST00000177987 79 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Mir7006-201ENSMUST00000183624 69 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm43601-201ENSMUST00000196294 945 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Gm42828-201ENSMUST00000199669 469 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 AC174082.1-201ENSMUST00000221106 307 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 AC115878.1-201ENSMUST00000227247 334 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.84□□□□□ -1.47
Trim56Q80VI1 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim56Q80VI1 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Trim56Q80VI1 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Trim56Q80VI1 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Trim56Q80VI1 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Trim56Q80VI1 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms