Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm14793-201ENSMUST00000118739 311 ntBASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm14821-201ENSMUST00000121975 435 ntBASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm25134-201ENSMUST00000082646 160 ntBASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm43872-201ENSMUST00000203218 2213 ntBASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm7592-201ENSMUST00000160674 627 ntBASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm4322-201ENSMUST00000191094 336 ntBASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm34005-201ENSMUST00000215834 282 ntBASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm37456-201ENSMUST00000193176 5837 ntBASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Mir6398-201ENSMUST00000184541 102 ntBASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm9174-201ENSMUST00000078149 255 ntBASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm42520-201ENSMUST00000199642 1502 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 AC160931.3-201ENSMUST00000222111 2267 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm11905-201ENSMUST00000117653 678 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm5384-201ENSMUST00000120313 463 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm25153-201ENSMUST00000157118 156 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm24059-201ENSMUST00000157493 312 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Mir7225-201ENSMUST00000184178 54 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm29610-201ENSMUST00000187749 453 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm38283-201ENSMUST00000193041 695 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm43804-201ENSMUST00000198280 456 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm6064-201ENSMUST00000203999 454 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm45382-201ENSMUST00000210607 151 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm45733-201ENSMUST00000212988 437 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Snora33-201ENSMUST00000093556 129 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm13386-201ENSMUST00000117677 124 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm6806-201ENSMUST00000120092 1006 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm23895-201ENSMUST00000158108 160 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm27254-201ENSMUST00000183926 517 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm17893-201ENSMUST00000203017 770 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a3E9PWQ3 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm16355-201ENSMUST00000128606 231 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm24914-201ENSMUST00000157285 313 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm25360-201ENSMUST00000178786 191 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Mir8119-201ENSMUST00000183371 129 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm18867-201ENSMUST00000198022 1179 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm43227-201ENSMUST00000202239 677 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC3.22□□□□□ -1.89
Col6a3E9PWQ3 Gm8129-201ENSMUST00000118230 213 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms