Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm26041-201ENSMUST00000158148 108 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm22646-201ENSMUST00000175130 115 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm20660-201ENSMUST00000177515 289 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm28976-201ENSMUST00000188070 144 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm29592-201ENSMUST00000189434 370 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm45678-201ENSMUST00000210509 295 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm45879-201ENSMUST00000212521 392 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 AC124420.1-201ENSMUST00000219779 791 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 AC238676.3-201ENSMUST00000223042 154 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 AC117656.1-201ENSMUST00000225826 339 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 AC144819.1-201ENSMUST00000227015 620 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm2710-201ENSMUST00000073196 603 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm23514-201ENSMUST00000082827 130 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Clcn1Q64347 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clcn1Q64347 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clcn1Q64347 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm38362-201ENSMUST00000192999 2064 ntBASIC7.1□□□□□ -1.27
Clcn1Q64347 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clcn1Q64347 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Clcn1Q64347 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Clcn1Q64347 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC7.1□□□□□ -1.27
Clcn1Q64347 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm37738-201ENSMUST00000192396 4716 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm43169-201ENSMUST00000199544 4734 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Nsd1-207ENSMUST00000224973 9905 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm37127-201ENSMUST00000192924 3036 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm42686-201ENSMUST00000199172 4108 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm44586-201ENSMUST00000207166 2737 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Clcn1Q64347 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clcn1Q64347 Mir193b-201ENSMUST00000103784 79 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm22273-201ENSMUST00000104040 132 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm15560-201ENSMUST00000117107 643 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm13122-201ENSMUST00000118380 453 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm15428-201ENSMUST00000121352 333 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Ear-ps4-201ENSMUST00000166834 450 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Mir6382-201ENSMUST00000184055 110 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm19641-201ENSMUST00000188432 417 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Clcn1Q64347 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Ighv1-35-201ENSMUST00000195265 351 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm43393-201ENSMUST00000200147 194 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm43968-201ENSMUST00000203388 389 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm45173-201ENSMUST00000206819 305 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm5735-201ENSMUST00000207053 167 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
Clcn1Q64347 AC160958.1-201ENSMUST00000224833 368 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm24207-201ENSMUST00000082781 108 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clcn1Q64347 n-R5s13-201ENSMUST00000093707 119 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 AC159193.1-201ENSMUST00000222872 2517 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm11743-201ENSMUST00000117385 1735 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm44679-201ENSMUST00000207202 2908 ntBASIC7.09□□□□□ -1.27
Clcn1Q64347 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.09□□□□□ -1.27
Clcn1Q64347 Gm37930-201ENSMUST00000194308 1886 ntBASIC7.09□□□□□ -1.28
Clcn1Q64347 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Clcn1Q64347 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Clcn1Q64347 Gm37760-201ENSMUST00000194726 3841 ntBASIC7.08□□□□□ -1.28
Clcn1Q64347 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
Clcn1Q64347 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Clcn1Q64347 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Clcn1Q64347 Gm21379-201ENSMUST00000179772 1955 ntBASIC7.08□□□□□ -1.28
Clcn1Q64347 Gm15088-201ENSMUST00000117973 1508 ntBASIC7.08□□□□□ -1.28
Clcn1Q64347 Gm15098-201ENSMUST00000119036 1508 ntBASIC7.08□□□□□ -1.28
Clcn1Q64347 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Clcn1Q64347 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Clcn1Q64347 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Clcn1Q64347 Abcc2-202ENSMUST00000099413 1926 ntBASIC7.08□□□□□ -1.28
Clcn1Q64347 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Clcn1Q64347 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Clcn1Q64347 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Clcn1Q64347 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC7.08□□□□□ -1.28
Clcn1Q64347 Gm14559-201ENSMUST00000121745 496 ntBASIC7.08□□□□□ -1.28
Clcn1Q64347 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms