Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm27024-201ENSMUST00000182561 755 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Gm7166-201ENSMUST00000199715 303 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm24715-201ENSMUST00000102377 95 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm14125-201ENSMUST00000113442 680 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm14970-201ENSMUST00000122289 355 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm12833-201ENSMUST00000136112 477 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm26101-201ENSMUST00000157246 105 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm23538-201ENSMUST00000157535 101 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm26170-201ENSMUST00000158419 148 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm8161-201ENSMUST00000168739 481 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm24812-201ENSMUST00000175315 284 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm20657-201ENSMUST00000177079 515 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm28781-201ENSMUST00000185760 696 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm29307-201ENSMUST00000187367 696 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm29339-201ENSMUST00000189613 696 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm28654-201ENSMUST00000189801 379 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm29407-201ENSMUST00000191468 696 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm43804-201ENSMUST00000198280 456 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm44382-201ENSMUST00000198683 122 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 AC129017.1-201ENSMUST00000228363 270 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm24610-201ENSMUST00000083270 109 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.59□□□□□ -1.51
Trim42Q9D2H5 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Trim42Q9D2H5 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.59□□□□□ -1.52
Trim42Q9D2H5 AC121598.3-201ENSMUST00000227179 1643 ntBASIC5.59□□□□□ -1.52
Trim42Q9D2H5 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Trim42Q9D2H5 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.59□□□□□ -1.52
Trim42Q9D2H5 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm25345-201ENSMUST00000104505 133 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm9043-201ENSMUST00000119677 314 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm12768-201ENSMUST00000120055 759 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm6565-201ENSMUST00000121217 438 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Mir1960-201ENSMUST00000157488 78 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm25348-201ENSMUST00000158961 111 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm17086-201ENSMUST00000171346 484 ntBASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim42Q9D2H5 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms