Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Gm3191-201ENSMUST00000167139 346 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Gm23968-201ENSMUST00000175047 125 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Mir6348-201ENSMUST00000183804 120 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Gm28023-201ENSMUST00000184556 60 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Gm27825-201ENSMUST00000184586 60 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Gm28288-201ENSMUST00000191019 214 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Gm17766-201ENSMUST00000209223 442 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Gm45367-201ENSMUST00000210171 347 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Gm8672-201ENSMUST00000221200 332 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 AC164883.9-201ENSMUST00000228042 399 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Gm4987-201ENSMUST00000078326 408 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Gm43527-201ENSMUST00000198749 3178 ntBASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdhb3Q91XZ7 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Pcdhb3Q91XZ7 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Pcdhb3Q91XZ7 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Pcdhb3Q91XZ7 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Pcdhb3Q91XZ7 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm12115-201ENSMUST00000119969 447 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm13967-201ENSMUST00000120404 380 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm12101-201ENSMUST00000121590 390 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm14747-201ENSMUST00000149888 984 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm25883-201ENSMUST00000157781 271 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm24191-201ENSMUST00000157977 122 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm25550-201ENSMUST00000158079 128 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm26353-201ENSMUST00000158224 255 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm22433-201ENSMUST00000158550 142 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm17065-201ENSMUST00000165245 239 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm25360-201ENSMUST00000178786 191 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Mir7046-201ENSMUST00000183435 66 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm18447-201ENSMUST00000187501 307 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm3785-201ENSMUST00000221000 202 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm3800-201ENSMUST00000221086 554 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 AC140477.1-201ENSMUST00000222354 246 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 AC159193.1-201ENSMUST00000222872 2517 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Fam107b-209ENSMUST00000226435 3602 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdhb3Q91XZ7 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Gm13876-201ENSMUST00000118451 261 ntBASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Gm12647-201ENSMUST00000118977 265 ntBASIC6.07□□□□□ -1.44
Pcdhb3Q91XZ7 Gm12156-201ENSMUST00000119188 554 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms