Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm15399-201ENSMUST00000118055 724 ntBASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm24922-201ENSMUST00000158511 102 ntBASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm20660-201ENSMUST00000177515 289 ntBASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm13439-201ENSMUST00000117541 409 ntBASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm12873-201ENSMUST00000119988 422 ntBASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm15786-201ENSMUST00000121079 450 ntBASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm23460-201ENSMUST00000083258 109 ntBASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Gm13433-201ENSMUST00000121701 240 ntBASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Gm44694-201ENSMUST00000205317 1298 ntBASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Gm18748-201ENSMUST00000198507 622 ntBASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Gm19726-201ENSMUST00000205008 240 ntBASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 AC159252.1-201ENSMUST00000224450 553 ntBASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Gm23911-201ENSMUST00000104596 134 ntBASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Gm11896-201ENSMUST00000121105 820 ntBASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a3E9PWQ3 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Gm23980-201ENSMUST00000157135 158 ntBASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Gm45845-201ENSMUST00000207326 582 ntBASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Gm5374-201ENSMUST00000222868 657 ntBASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Gm25068-201ENSMUST00000103895 110 ntBASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Gm14843-201ENSMUST00000119596 212 ntBASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Gm43992-201ENSMUST00000204358 197 ntBASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 CT030662.2-201ENSMUST00000226942 805 ntBASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col6a3E9PWQ3 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
Col6a3E9PWQ3 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 136.8 ms