Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm44661-201ENSMUST00000208830 3503 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm45104-201ENSMUST00000208748 4350 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Hrh1-204ENSMUST00000161220 2817 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Igkv2-112-202ENSMUST00000103319 358 ntAPPRIS ALT2 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm25419-201ENSMUST00000104215 191 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm24070-201ENSMUST00000104519 130 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm11997-201ENSMUST00000118697 313 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm12213-201ENSMUST00000119924 353 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Mir1907-201ENSMUST00000122509 90 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm25782-201ENSMUST00000122526 289 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm23886-201ENSMUST00000122684 313 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 4930570D08Rik-201ENSMUST00000130431 196 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Ptgds-201ENSMUST00000015234 901 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm24994-201ENSMUST00000157414 121 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Mir1962-201ENSMUST00000157516 121 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm26346-201ENSMUST00000157525 329 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm24781-201ENSMUST00000157636 117 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm24850-201ENSMUST00000158029 119 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm22670-201ENSMUST00000158724 143 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm24682-201ENSMUST00000158764 137 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm24738-201ENSMUST00000158856 123 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm26290-201ENSMUST00000158891 145 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm24899-201ENSMUST00000158892 73 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm16289-201ENSMUST00000162079 183 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Tmem95-201ENSMUST00000178597 531 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Snhg7-201ENSMUST00000181621 139 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Mir6769b-201ENSMUST00000184793 60 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm28623-201ENSMUST00000187219 192 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm45227-201ENSMUST00000205585 169 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm45422-201ENSMUST00000211476 246 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 AC151971.3-201ENSMUST00000214694 404 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm7614-201ENSMUST00000222235 328 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 AC165287.1-201ENSMUST00000224985 178 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Snora9-201ENSMUST00000082579 133 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm22298-201ENSMUST00000082662 133 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm22304-201ENSMUST00000082688 129 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm22809-201ENSMUST00000082743 156 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm24451-201ENSMUST00000083353 133 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Snora74a-201ENSMUST00000083715 196 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm24258-201ENSMUST00000083739 133 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm10805-201ENSMUST00000099710 399 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm10390-201ENSMUST00000180812 3975 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm43937-201ENSMUST00000204640 3122 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Thsd1-203ENSMUST00000162447 3273 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Vmn2r54-201ENSMUST00000086210 2421 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Sfi1-201ENSMUST00000066391 3898 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Xpnpep2-203ENSMUST00000115000 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Rab5b-201ENSMUST00000000727 3180 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Zfp408-201ENSMUST00000099714 3469 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms