Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm42755-201ENSMUST00000198533 1493 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm25096-201ENSMUST00000104043 129 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm13331-201ENSMUST00000117500 448 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm15297-201ENSMUST00000117795 290 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm16216-201ENSMUST00000118970 1111 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm12935-201ENSMUST00000119352 246 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm11369-201ENSMUST00000120812 318 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm25706-201ENSMUST00000157828 247 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm24192-201ENSMUST00000157978 145 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm24217-201ENSMUST00000158260 133 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a1Q04857 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm3084-201ENSMUST00000169967 598 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm25670-201ENSMUST00000178423 107 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm26239-201ENSMUST00000178842 107 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm24267-201ENSMUST00000179841 107 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm28146-201ENSMUST00000185517 701 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm28574-201ENSMUST00000185757 699 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm28397-201ENSMUST00000187970 699 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm29366-201ENSMUST00000190481 699 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm45870-201ENSMUST00000211269 601 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 AC160016.1-201ENSMUST00000215589 448 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a1Q04857 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Olfr151-202ENSMUST00000221099 929 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col6a1Q04857 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm24292-201ENSMUST00000082888 107 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Col6a1Q04857 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a1Q04857 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Col6a1Q04857 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a1Q04857 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a1Q04857 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a1Q04857 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm26300-201ENSMUST00000102282 94 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm14750-201ENSMUST00000118262 516 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm11262-201ENSMUST00000119326 833 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm12924-201ENSMUST00000121747 318 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm23118-201ENSMUST00000122657 187 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm25806-201ENSMUST00000122782 122 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm23179-201ENSMUST00000158693 304 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm17421-201ENSMUST00000167845 674 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Mir6481-201ENSMUST00000184617 110 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm20056-201ENSMUST00000194813 519 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm43652-201ENSMUST00000196219 675 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm43541-201ENSMUST00000197208 581 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm7721-201ENSMUST00000200446 546 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.78□□□□□ -1.48
Col6a1Q04857 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm18194-201ENSMUST00000210455 481 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm45722-201ENSMUST00000213075 466 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm18703-201ENSMUST00000215318 333 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm24928-201ENSMUST00000083399 107 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm25897-201ENSMUST00000083709 107 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm3867-201ENSMUST00000086108 279 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a1Q04857 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a1Q04857 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.78□□□□□ -1.48
Col6a1Q04857 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a1Q04857 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms