Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm14294-201ENSMUST00000119749 751 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Gm15501-202ENSMUST00000140687 625 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Gm22235-201ENSMUST00000157085 110 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Gm22337-201ENSMUST00000157721 132 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Gm23892-201ENSMUST00000158105 130 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Gm17065-201ENSMUST00000165245 239 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox18P43680 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sox18P43680 Gm25360-201ENSMUST00000178786 191 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.85□□□□□ -1.47
Sox18P43680 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Gm43554-201ENSMUST00000199987 186 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC5.85□□□□□ -1.47
Sox18P43680 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox18P43680 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sox18P43680 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Sox18P43680 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Sox18P43680 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
Sox18P43680 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox18P43680 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox18P43680 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox18P43680 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox18P43680 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox18P43680 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox18P43680 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.85□□□□□ -1.47
Sox18P43680 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox18P43680 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Gm45876-201ENSMUST00000212698 2709 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Gm37423-201ENSMUST00000194246 3342 ntBASIC5.84□□□□□ -1.47
Sox18P43680 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox18P43680 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Sox18P43680 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox18P43680 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox18P43680 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sox18P43680 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox18P43680 Gm26078-201ENSMUST00000104067 128 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Gm25415-201ENSMUST00000104220 132 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Gm13604-201ENSMUST00000119332 482 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Gm14841-201ENSMUST00000121067 758 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.84□□□□□ -1.47
Sox18P43680 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.84□□□□□ -1.47
Sox18P43680 Gm3053-201ENSMUST00000161709 616 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Mir6367-201ENSMUST00000183385 102 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Gm27887-201ENSMUST00000184367 102 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox18P43680 Gm17934-201ENSMUST00000192818 422 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Gm38015-201ENSMUST00000193048 188 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Gm5552-201ENSMUST00000197149 515 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Gm38670-201ENSMUST00000199248 77 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.84□□□□□ -1.47
Sox18P43680 Gm44977-201ENSMUST00000205283 420 ntBASIC5.84□□□□□ -1.47
Sox18P43680 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Gm24045-201ENSMUST00000083113 98 ntBASIC5.84□□□□□ -1.47
Sox18P43680 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.84□□□□□ -1.47
Sox18P43680 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox18P43680 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sox18P43680 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sox18P43680 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Sox18P43680 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Sox18P43680 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox18P43680 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Sox18P43680 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Sox18P43680 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sox18P43680 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox18P43680 Gm38381-201ENSMUST00000193594 2275 ntBASIC5.83□□□□□ -1.48
Sox18P43680 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.83□□□□□ -1.48
Sox18P43680 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox18P43680 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sox18P43680 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sox18P43680 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sox18P43680 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox18P43680 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox18P43680 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox18P43680 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Sox18P43680 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox18P43680 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox18P43680 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.83□□□□□ -1.48
Sox18P43680 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms