Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm17915-201ENSMUST00000222077 548 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm6104-201ENSMUST00000078030 603 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm26156-201ENSMUST00000116999 123 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm12803-201ENSMUST00000118907 821 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm14804-201ENSMUST00000122322 508 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm22479-201ENSMUST00000122566 81 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm25291-201ENSMUST00000122795 144 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm3242-201ENSMUST00000171273 485 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm26960-201ENSMUST00000182263 412 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm27037-201ENSMUST00000182270 960 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm28008-201ENSMUST00000184021 186 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm44776-201ENSMUST00000207212 381 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm18127-201ENSMUST00000208479 725 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Supt4b-201ENSMUST00000214434 351 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 AC152946.2-201ENSMUST00000219071 337 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Mir17-201ENSMUST00000083574 84 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.86□□□□□ -1.47
Clp1Q99LI9 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Clp1Q99LI9 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm24578-201ENSMUST00000103970 129 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm23274-201ENSMUST00000104056 130 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm25560-201ENSMUST00000104606 176 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm14355-201ENSMUST00000117352 264 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm14333-201ENSMUST00000130484 264 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm23078-201ENSMUST00000157848 148 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Scarna13-201ENSMUST00000158164 275 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm22242-201ENSMUST00000175224 118 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms