Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox9Q04887 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
Sox9Q04887 Gm4501-201ENSMUST00000207330 551 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm4558-201ENSMUST00000207886 521 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm4528-201ENSMUST00000207905 551 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm18462-201ENSMUST00000208112 417 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox9Q04887 Gm45367-201ENSMUST00000210171 347 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm2628-201ENSMUST00000218019 426 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox9Q04887 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox9Q04887 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox9Q04887 AC119573.1-201ENSMUST00000227960 757 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox9Q04887 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox9Q04887 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox9Q04887 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox9Q04887 Gm23614-201ENSMUST00000082598 107 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm24623-201ENSMUST00000082616 194 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox9Q04887 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox9Q04887 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox9Q04887 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox9Q04887 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox9Q04887 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox9Q04887 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox9Q04887 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.23□□□□□ -1.57
Sox9Q04887 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox9Q04887 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox9Q04887 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm13232-201ENSMUST00000121816 632 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm16259-201ENSMUST00000145241 553 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC5.22□□□□□ -1.57
Sox9Q04887 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm25412-201ENSMUST00000180258 107 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Gm25873-201ENSMUST00000180317 107 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC5.22□□□□□ -1.57
Sox9Q04887 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm37961-201ENSMUST00000192729 299 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Gm37869-201ENSMUST00000193385 595 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Gm38234-201ENSMUST00000195204 421 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Gm19131-201ENSMUST00000203408 789 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm45673-201ENSMUST00000210293 358 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm45400-201ENSMUST00000211603 653 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.22□□□□□ -1.57
Sox9Q04887 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 AC145736.1-201ENSMUST00000214661 479 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Gm7093-201ENSMUST00000223004 581 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Sox9Q04887 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Sox9Q04887 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Sox9Q04887 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Sox9Q04887 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Sox9Q04887 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sox9Q04887 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.22□□□□□ -1.57
Sox9Q04887 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Sox9Q04887 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox9Q04887 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Sox9Q04887 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Sox9Q04887 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Sox9Q04887 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Sox9Q04887 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Sox9Q04887 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Sox9Q04887 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Sox9Q04887 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
Sox9Q04887 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.21□□□□□ -1.58
Sox9Q04887 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sox9Q04887 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sox9Q04887 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms