Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ParpbpQ6IRT3 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
ParpbpQ6IRT3 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.09□□□□□ -1.6
ParpbpQ6IRT3 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
ParpbpQ6IRT3 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
ParpbpQ6IRT3 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.09□□□□□ -1.6
ParpbpQ6IRT3 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
ParpbpQ6IRT3 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm22592-201ENSMUST00000104242 131 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm15364-201ENSMUST00000119618 585 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm7189-201ENSMUST00000119811 429 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm13363-201ENSMUST00000122008 522 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm23214-201ENSMUST00000122716 157 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm26086-201ENSMUST00000157902 263 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm22136-201ENSMUST00000158751 268 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm27754-201ENSMUST00000183340 126 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Mir7653-201ENSMUST00000184358 61 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm7858-201ENSMUST00000190177 622 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm43945-201ENSMUST00000203595 754 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm44870-201ENSMUST00000207291 357 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm18409-202ENSMUST00000220105 529 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Clec2j-201ENSMUST00000032517 515 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm23515-201ENSMUST00000082829 107 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm22423-201ENSMUST00000082861 184 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm24764-201ENSMUST00000083686 199 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
ParpbpQ6IRT3 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm6591-201ENSMUST00000121063 434 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm5401-201ENSMUST00000122444 365 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm25184-201ENSMUST00000157753 163 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm25365-201ENSMUST00000158852 121 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm27796-201ENSMUST00000183863 261 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm27190-201ENSMUST00000184890 542 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm28943-201ENSMUST00000186187 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm28736-201ENSMUST00000186257 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm18802-201ENSMUST00000186270 888 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm29401-201ENSMUST00000186690 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm29178-204ENSMUST00000186784 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm28589-201ENSMUST00000186991 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm28936-201ENSMUST00000187153 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm29121-201ENSMUST00000187611 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm28243-201ENSMUST00000187801 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm28844-202ENSMUST00000187977 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm28061-201ENSMUST00000189085 807 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm29058-201ENSMUST00000189510 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm29624-201ENSMUST00000190018 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm28780-201ENSMUST00000190223 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm28969-211ENSMUST00000190992 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm28990-207ENSMUST00000191219 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm36468-201ENSMUST00000192119 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm31572-201ENSMUST00000193341 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm30175-201ENSMUST00000194173 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm30858-201ENSMUST00000195516 615 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm43723-201ENSMUST00000196886 189 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm42621-201ENSMUST00000198114 275 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Mir3970-201ENSMUST00000199287 90 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm19761-201ENSMUST00000205372 391 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 Gm45249-201ENSMUST00000211021 348 ntBASIC5.07□□□□□ -1.6
ParpbpQ6IRT3 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms