Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 AC116726.2-201ENSMUST00000217629 986 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Gm18388-201ENSMUST00000222339 557 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Gm18338-201ENSMUST00000222381 560 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim28Q62318 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Trim28Q62318 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim28Q62318 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim28Q62318 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Trim28Q62318 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Trim28Q62318 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim28Q62318 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Trim28Q62318 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim28Q62318 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim28Q62318 AC154323.3-201ENSMUST00000226927 1660 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Trim28Q62318 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim28Q62318 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim28Q62318 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.68□□□□□ -1.5
Trim28Q62318 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim28Q62318 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.68□□□□□ -1.5
Trim28Q62318 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim28Q62318 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC5.68□□□□□ -1.5
Trim28Q62318 Gm12639-201ENSMUST00000121400 493 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Gm11385-201ENSMUST00000121513 570 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Gm26362-201ENSMUST00000158865 315 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Gm22857-201ENSMUST00000174969 134 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Trim28Q62318 Gm27315-201ENSMUST00000183977 154 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Gm27899-201ENSMUST00000184715 64 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim28Q62318 Gm28304-201ENSMUST00000185977 312 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim28Q62318 Gm29256-201ENSMUST00000189094 312 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Gm28484-201ENSMUST00000190606 312 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Gm18306-201ENSMUST00000207338 569 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Gm34783-201ENSMUST00000209159 303 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Gm21112-201ENSMUST00000212224 578 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Gm7760-201ENSMUST00000212265 578 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Gm18228-201ENSMUST00000217297 1091 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim28Q62318 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim28Q62318 Gm19786-201ENSMUST00000222589 580 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim28Q62318 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim28Q62318 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.68□□□□□ -1.5
Trim28Q62318 Gm42991-201ENSMUST00000196468 3837 ntBASIC5.68□□□□□ -1.5
Trim28Q62318 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.68□□□□□ -1.5
Trim28Q62318 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Trim28Q62318 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim28Q62318 Gm42536-201ENSMUST00000197562 1613 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim28Q62318 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim28Q62318 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Trim28Q62318 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim28Q62318 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim28Q62318 Gm12814-201ENSMUST00000117091 846 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Gm15151-201ENSMUST00000117106 177 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Gm14677-201ENSMUST00000117866 486 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Gm13785-201ENSMUST00000119099 690 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Gm11410-201ENSMUST00000120053 1143 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim28Q62318 Gm23760-201ENSMUST00000158350 116 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC5.67□□□□□ -1.5
Trim28Q62318 Mir6398-201ENSMUST00000184541 102 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Gm28997-201ENSMUST00000188759 429 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Gm37501-201ENSMUST00000192830 691 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Gm45673-201ENSMUST00000210293 358 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim28Q62318 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Gm18997-201ENSMUST00000216353 822 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim28Q62318 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim28Q62318 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim28Q62318 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim28Q62318 Gm7093-201ENSMUST00000223004 581 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 AC117202.3-201ENSMUST00000228532 310 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim28Q62318 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim28Q62318 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim28Q62318 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim28Q62318 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim28Q62318 Gm14442-201ENSMUST00000119690 1736 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Gm7452-202ENSMUST00000202891 3039 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim28Q62318 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim28Q62318 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.67□□□□□ -1.5
Trim28Q62318 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim28Q62318 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim28Q62318 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms